Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LINC01101-201ENST00000622953 1884 ntBASIC18.19■□□□□ 0.5
NEK1Q96PY6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 AC007541.1-201ENST00000570282 1469 ntBASIC18.19■□□□□ 0.5
NEK1Q96PY6 AC093525.8-201ENST00000624099 1342 ntBASIC18.19■□□□□ 0.5
NEK1Q96PY6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 FGD5P1-202ENST00000614866 2498 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 RPL13AP25-201ENST00000484130 612 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 AC104596.2-201ENST00000512793 793 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 AL132655.2-201ENST00000596276 594 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 AC004233.3-201ENST00000607794 1269 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 AC093726.1-201ENST00000608064 963 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 AC008761.3-201ENST00000624803 892 ntBASIC18.18■□□□□ 0.5
NEK1Q96PY6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
NEK1Q96PY6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEK1Q96PY6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.17■□□□□ 0.5
NEK1Q96PY6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 AC098850.1-201ENST00000419919 790 ntBASIC18.17■□□□□ 0.5
NEK1Q96PY6 AL353779.1-201ENST00000434793 351 ntBASIC18.17■□□□□ 0.5
NEK1Q96PY6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 CHCHD2P3-201ENST00000603038 451 ntBASIC18.17■□□□□ 0.5
NEK1Q96PY6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 AL360270.3-201ENST00000609118 1348 ntBASIC18.17■□□□□ 0.5
NEK1Q96PY6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NEK1Q96PY6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms