Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 BTBD6P1-201ENST00000412176 1267 ntBASIC19■□□□□ 0.63
CCDC85AQ96PX6 GPAA1P2-201ENST00000417923 928 ntBASIC19■□□□□ 0.63
CCDC85AQ96PX6 BCYRN1-201ENST00000418539 200 ntBASIC19■□□□□ 0.63
CCDC85AQ96PX6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 RPSAP36-202ENST00000494591 1261 ntBASIC19■□□□□ 0.63
CCDC85AQ96PX6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19■□□□□ 0.63
CCDC85AQ96PX6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC85AQ96PX6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 MTX1P1-201ENST00000440904 838 ntBASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 AL096828.3-201ENST00000615354 462 ntBASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC85AQ96PX6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 CNN2P10-201ENST00000443067 918 ntBASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 AL591846.1-201ENST00000451736 433 ntBASIC18.98■□□□□ 0.63
CCDC85AQ96PX6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms