Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ZBED1P1-201ENST00000502364 1930 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 REXO1L2P-201ENST00000425429 2069 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 RNU1-114P-201ENST00000365297 166 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 NUS1P3-201ENST00000423502 862 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 COX20P2-201ENST00000452636 358 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AL358472.5-202ENST00000641448 1267 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AL360270.3-201ENST00000609118 1348 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.76□□□□□ -0.37
GAFA1Q96PS6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GAFA1Q96PS6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 HLA-K-203ENST00000430151 1046 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AC011495.1-201ENST00000498085 584 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AP001063.1-201ENST00000568332 529 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms