Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RNF183Q96D59 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RNF183Q96D59 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF183Q96D59 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF183Q96D59 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.51□□□□□ -0.57
RNF183Q96D59 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.51□□□□□ -0.57
RNF183Q96D59 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 AC010327.5-201ENST00000586923 3061 ntBASIC11.51□□□□□ -0.57
RNF183Q96D59 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RNF183Q96D59 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RNF183Q96D59 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RNF183Q96D59 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RNF183Q96D59 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.5□□□□□ -0.57
RNF183Q96D59 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
RNF183Q96D59 AC136604.1-201ENST00000418535 575 ntBASIC11.5□□□□□ -0.57
RNF183Q96D59 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.5□□□□□ -0.57
RNF183Q96D59 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF183Q96D59 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.5□□□□□ -0.57
RNF183Q96D59 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
RNF183Q96D59 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms