Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 INTS4P2-202ENST00000614726 2019 ntBASIC16.26■□□□□ 0.19
ATP2A3Q93084 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 AC134915.1-201ENST00000426461 574 ntBASIC16.26■□□□□ 0.19
ATP2A3Q93084 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ACTG1P3-201ENST00000431775 1114 ntBASIC16.26■□□□□ 0.19
ATP2A3Q93084 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 MIR5189-201ENST00000577370 114 ntBASIC16.26■□□□□ 0.19
ATP2A3Q93084 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 RPSAP52-203ENST00000622976 1023 ntBASIC16.26■□□□□ 0.19
ATP2A3Q93084 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP2A3Q93084 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 KRT18P64-201ENST00000434946 1219 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 CROCCP4-201ENST00000457096 498 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 AC104989.1-201ENST00000519711 778 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 SLC25A47P1-201ENST00000531577 414 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 HNRNPUP1-201ENST00000554987 333 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 AL359711.2-201ENST00000563105 872 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 MIR6799-201ENST00000620297 69 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP2A3Q93084 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ATP2A3Q93084 AC013268.4-201ENST00000637413 2228 ntBASIC16.25■□□□□ 0.19
ATP2A3Q93084 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP2A3Q93084 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A3Q93084 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms