Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC107Q8WV48 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CCDC107Q8WV48 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CCDC107Q8WV48 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CCDC107Q8WV48 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CCDC107Q8WV48 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.4□□□□□ -0.27
CCDC107Q8WV48 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 TIMM8BP1-201ENST00000452384 211 ntBASIC13.39□□□□□ -0.27
CCDC107Q8WV48 IGHV3-62-201ENST00000520057 340 ntBASIC13.39□□□□□ -0.27
CCDC107Q8WV48 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 FAM86C2P-203ENST00000528684 1004 ntBASIC13.39□□□□□ -0.27
CCDC107Q8WV48 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 INTS4P1-203ENST00000641008 3683 ntBASIC13.39□□□□□ -0.27
CCDC107Q8WV48 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC107Q8WV48 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 KRT8P48-201ENST00000515599 1220 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC243562.2-201ENST00000561247 970 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC040169.1-201ENST00000565382 521 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC061975.2-201ENST00000581722 295 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC026120.1-201ENST00000611536 926 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms