Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 PFN1P12-201ENST00000455938 534 ntBASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AL590640.2-201ENST00000457038 527 ntBASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AC099548.2-209ENST00000480264 625 ntBASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 FAM86HP-204ENST00000513466 959 ntBASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AL606495.2-201ENST00000605867 535 ntBASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
SHKBP1Q8TBC3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 KLF2P2-201ENST00000416807 1039 ntBASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 AC244093.1-201ENST00000610837 814 ntBASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 AC132938.4-201ENST00000623835 848 ntBASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.11■□□□□ 0.17
SHKBP1Q8TBC3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms