Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 MIR648-201ENST00000385046 94 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 MIR658-201ENST00000385210 100 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 AC234783.1-201ENST00000441761 496 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 AL512343.1-201ENST00000605837 169 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 MIR6805-201ENST00000615055 62 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 KRT8P22-201ENST00000562317 1415 ntBASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDND2Q8NHS1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 BRI3BPP1-201ENST00000594224 787 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms