Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF397Q8NF99 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 AC136759.1-202ENST00000530858 2194 ntBASIC17.11■□□□□ 0.33
ZNF397Q8NF99 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 AC134684.3-201ENST00000641758 218 ntBASIC17.11■□□□□ 0.33
ZNF397Q8NF99 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF397Q8NF99 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AL627223.1-201ENST00000416693 442 ntBASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AC004967.1-201ENST00000453589 447 ntBASIC17.1■□□□□ 0.33
ZNF397Q8NF99 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AC093520.2-201ENST00000561830 333 ntBASIC17.1■□□□□ 0.33
ZNF397Q8NF99 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 AC004835.2-201ENST00000603762 682 ntBASIC17.1■□□□□ 0.33
ZNF397Q8NF99 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF397Q8NF99 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF397Q8NF99 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF397Q8NF99 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF397Q8NF99 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF397Q8NF99 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms