Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 REXO1L2P-201ENST00000425429 2069 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 INE2-201ENST00000630399 1874 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 AC074138.1-201ENST00000611182 1303 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 VDAC1P1-201ENST00000439229 848 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 HNRNPA1P36-201ENST00000521313 955 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 AC002472.3-201ENST00000640124 621 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 CAP2P1-201ENST00000557743 1390 ntBASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 HNRNPA1P41-201ENST00000397777 928 ntBASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 NAP1L6-202ENST00000641404 1222 ntBASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
CFAP43Q8NDM7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 NDUFS6P1-201ENST00000485187 316 ntBASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 AC009084.3-201ENST00000623356 437 ntBASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 RPS9P1-201ENST00000419943 583 ntBASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 TLE1P1-201ENST00000422965 589 ntBASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 AC104073.2-201ENST00000453737 312 ntBASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 SNORD3B-2-202ENST00000571722 791 ntBASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CFAP43Q8NDM7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 AP002803.1-201ENST00000528836 498 ntBASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CFAP43Q8NDM7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
CFAP43Q8NDM7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC23.39■■□□□ 1.34
CFAP43Q8NDM7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC23.39■■□□□ 1.34
CFAP43Q8NDM7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms