Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 AC120045.2-201ENST00000567334 178 ntBASIC15.42■□□□□ 0.06
RBFAQ8N0V3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 AC233724.13-201ENST00000598383 410 ntBASIC15.42■□□□□ 0.06
RBFAQ8N0V3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RBFAQ8N0V3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 C1QBPP1-201ENST00000400117 770 ntBASIC15.41■□□□□ 0.06
RBFAQ8N0V3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SOCS2P1-201ENST00000417727 557 ntBASIC15.41■□□□□ 0.06
RBFAQ8N0V3 HLA-V-201ENST00000429037 534 ntBASIC15.41■□□□□ 0.06
RBFAQ8N0V3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SLC25A47P1-201ENST00000531577 414 ntBASIC15.41■□□□□ 0.06
RBFAQ8N0V3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 AC068418.2-201ENST00000577309 3703 ntBASIC15.41■□□□□ 0.06
RBFAQ8N0V3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RBFAQ8N0V3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ACTG1P3-201ENST00000431775 1114 ntBASIC15.4■□□□□ 0.06
RBFAQ8N0V3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 KRT223P-202ENST00000449164 1292 ntBASIC15.4■□□□□ 0.06
RBFAQ8N0V3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RBFAQ8N0V3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms