Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 CYP46A4P-201ENST00000414953 267 ntBASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
NPAS3Q8IXF0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AL354877.1-201ENST00000424412 413 ntBASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AC100850.1-201ENST00000506768 649 ntBASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 Z99916.3-201ENST00000623422 1080 ntBASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 AC055811.4-201ENST00000624039 1754 ntBASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS3Q8IXF0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC046158.3-201ENST00000624947 2558 ntBASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 SPTLC1P5-201ENST00000450718 252 ntBASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC138466.3-201ENST00000619983 221 ntBASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 AC091812.3-201ENST00000621362 345 ntBASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
NPAS3Q8IXF0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms