Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 AC079776.1-201ENST00000401540 1152 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 ACTBP8-201ENST00000403258 1108 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 BOLA2P3-201ENST00000404566 256 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 AL139094.1-201ENST00000405549 1188 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 ACA64.2-201ENST00000459014 129 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 AC106760.1-201ENST00000508690 800 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 HILS1-202ENST00000545329 423 ntBASIC15.06■□□□□ 0
LRRTM4Q86VH4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRTM4Q86VH4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRRTM4Q86VH4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRRTM4Q86VH4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRRTM4Q86VH4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRRTM4Q86VH4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
LRRTM4Q86VH4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
LRRTM4Q86VH4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
LRRTM4Q86VH4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRTM4Q86VH4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRRTM4Q86VH4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.05■□□□□ -0
LRRTM4Q86VH4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRTM4Q86VH4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRTM4Q86VH4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms