Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 CRB3P1-201ENST00000449338 276 ntBASIC14.21□□□□□ -0.13
ZNF550Q7Z398 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 AP005018.1-201ENST00000525475 301 ntBASIC14.21□□□□□ -0.13
ZNF550Q7Z398 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 AC009407.1-201ENST00000568958 598 ntBASIC14.21□□□□□ -0.13
ZNF550Q7Z398 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF550Q7Z398 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF550Q7Z398 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ZNF550Q7Z398 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.21□□□□□ -0.14
ZNF550Q7Z398 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF550Q7Z398 LINC01101-201ENST00000622953 1884 ntBASIC14.21□□□□□ -0.14
ZNF550Q7Z398 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.2□□□□□ -0.14
ZNF550Q7Z398 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC114501.2-201ENST00000439631 535 ntBASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC009477.1-201ENST00000452936 217 ntBASIC14.2□□□□□ -0.14
ZNF550Q7Z398 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC092337.1-201ENST00000568699 1129 ntBASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC004461.2-201ENST00000629517 803 ntBASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF550Q7Z398 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 AC099063.4-201ENST00000641099 1602 ntBASIC14.19□□□□□ -0.14
ZNF550Q7Z398 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF550Q7Z398 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms