Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CHMP1BQ7LBR1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.31□□□□□ -0.12
CHMP1BQ7LBR1 AC007541.1-201ENST00000570282 1469 ntBASIC14.31□□□□□ -0.12
CHMP1BQ7LBR1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CHMP1BQ7LBR1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
CHMP1BQ7LBR1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.31□□□□□ -0.12
CHMP1BQ7LBR1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 MEP1AP4-201ENST00000423244 1087 ntBASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 DOC2GP-202ENST00000514950 1163 ntBASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AL358472.5-202ENST00000641448 1267 ntBASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 AL359258.3-201ENST00000622910 2331 ntBASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 PRAL-201ENST00000624952 3286 ntBASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP1BQ7LBR1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC134407.2-201ENST00000625089 1978 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 SPDYE19P-201ENST00000338590 713 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC087499.6-201ENST00000411576 835 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC104794.3-201ENST00000566840 1248 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AL450472.2-201ENST00000603663 1156 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms