Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AP006288.1-201ENST00000446065 395 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 AC069335.1-201ENST00000489972 472 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 LINC01225-203ENST00000563550 1244 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 AL691403.2-201ENST00000618460 490 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 MYO15B-237ENST00000642007 4893 ntBASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM53Q6P2H8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AL118506.1-201ENST00000601296 3082 ntBASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AL928921.2-201ENST00000641325 2442 ntBASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 MIR648-201ENST00000385046 94 ntBASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AL627223.1-201ENST00000416693 442 ntBASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AC142381.1-201ENST00000426099 345 ntBASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 PCDHA3-202ENST00000532566 4594 ntBASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM53Q6P2H8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms