Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 FAM197Y3-203ENST00000618346 717 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AC010507.1-201ENST00000633895 436 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 CYP4F24P-201ENST00000586049 1580 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 AC018442.1-201ENST00000421439 2061 ntBASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ANKRD55Q3KP44 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.83□□□□□ -0.35
ANKRD55Q3KP44 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AC015802.1-201ENST00000588104 1449 ntBASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 MED15P5-201ENST00000423150 992 ntBASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 GHSR-202ENST00000427970 912 ntBASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ANKRD55Q3KP44 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 AC089987.1-201ENST00000551654 2209 ntBASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 RHOQP3-201ENST00000437982 621 ntBASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 AC009947.1-201ENST00000444350 727 ntBASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.82□□□□□ -0.36
ANKRD55Q3KP44 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms