Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 FXNP2-201ENST00000411625 547 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC104073.2-201ENST00000453737 312 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 RN7SL11P-201ENST00000471305 293 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC021723.1-201ENST00000486306 515 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC024681.1-201ENST00000521917 487 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 MIR4706-201ENST00000582134 82 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC026740.1-201ENST00000607068 791 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AF254983.2-201ENST00000612331 135 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC004923.1-202ENST00000642106 209 ntBASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TRIM71Q2Q1W2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM71Q2Q1W2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM71Q2Q1W2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
TRIM71Q2Q1W2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM71Q2Q1W2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
TRIM71Q2Q1W2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 AL133466.1-201ENST00000447582 150 ntBASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 MIR4722-201ENST00000578292 60 ntBASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 AC068587.8-201ENST00000641239 219 ntBASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM71Q2Q1W2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms