Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AC006449.6-201ENST00000612330 2296 ntBASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 FAM45BP-202ENST00000592932 1624 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 HSPB1P2-201ENST00000448722 546 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 U62317.3-201ENST00000608319 855 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AC091812.3-201ENST00000621362 345 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 KRT8P35-201ENST00000483942 1338 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 AP001282.1-201ENST00000531301 1499 ntBASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTC1Q2NKJ3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 AC091046.1-201ENST00000331871 207 ntBASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 AC104457.1-201ENST00000401024 814 ntBASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 AC112504.1-201ENST00000623415 1841 ntBASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTC1Q2NKJ3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.39■□□□□ 0.22
CTC1Q2NKJ3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CTC1Q2NKJ3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTC1Q2NKJ3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTC1Q2NKJ3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms