Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AC002472.2-201ENST00000442739 958 ntBASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 KRT8P22-201ENST00000562317 1415 ntBASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 SPDYE22P-201ENST00000582158 798 ntBASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AC007292.2-201ENST00000593524 1812 ntBASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AC140479.7-201ENST00000636301 2332 ntBASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 AC007686.3-201ENST00000619017 3487 ntBASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO1Q2MKA7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC236430.1-201ENST00000402231 743 ntBASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 MYCLP2-201ENST00000449268 967 ntBASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ELK1P1-201ENST00000485699 580 ntBASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC104596.2-201ENST00000512793 793 ntBASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 CTBP2P3-201ENST00000585629 1255 ntBASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AL355385.1-201ENST00000606123 409 ntBASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO1Q2MKA7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms