Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDR1Q08345 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DDR1Q08345 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
DDR1Q08345 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
DDR1Q08345 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 AP003680.1-201ENST00000598970 3660 ntBASIC18.78■□□□□ 0.6
DDR1Q08345 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 AC078875.1-201ENST00000431907 724 ntBASIC18.78■□□□□ 0.6
DDR1Q08345 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.78■□□□□ 0.6
DDR1Q08345 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.78■□□□□ 0.6
DDR1Q08345 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.78■□□□□ 0.6
DDR1Q08345 POU5F1P2-201ENST00000521750 823 ntBASIC18.78■□□□□ 0.6
DDR1Q08345 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
DDR1Q08345 DNM1P30-201ENST00000563586 452 ntBASIC18.78■□□□□ 0.6
DDR1Q08345 MIR3677-201ENST00000578964 60 ntBASIC18.78■□□□□ 0.6
DDR1Q08345 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.78■□□□□ 0.6
DDR1Q08345 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDR1Q08345 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDR1Q08345 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.78■□□□□ 0.6
DDR1Q08345 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DDR1Q08345 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.77■□□□□ 0.6
DDR1Q08345 KRT8P21-201ENST00000430398 1491 ntBASIC18.77■□□□□ 0.6
DDR1Q08345 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.77■□□□□ 0.6
DDR1Q08345 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.77■□□□□ 0.6
DDR1Q08345 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DDR1Q08345 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DDR1Q08345 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.77■□□□□ 0.6
DDR1Q08345 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDR1Q08345 AL118508.1-201ENST00000613502 2345 ntBASIC18.77■□□□□ 0.6
DDR1Q08345 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.77■□□□□ 0.6
DDR1Q08345 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DDR1Q08345 RN7SL258P-201ENST00000478664 300 ntBASIC18.77■□□□□ 0.6
DDR1Q08345 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DDR1Q08345 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DDR1Q08345 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.77■□□□□ 0.6
DDR1Q08345 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.77■□□□□ 0.6
DDR1Q08345 AC007881.3-201ENST00000608897 607 ntBASIC18.77■□□□□ 0.6
DDR1Q08345 AL157813.1-201ENST00000612996 587 ntBASIC18.77■□□□□ 0.6
DDR1Q08345 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.77■□□□□ 0.6
DDR1Q08345 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDR1Q08345 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.77■□□□□ 0.6
DDR1Q08345 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
DDR1Q08345 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
DDR1Q08345 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDR1Q08345 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
DDR1Q08345 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.76■□□□□ 0.59
DDR1Q08345 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.76■□□□□ 0.59
DDR1Q08345 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
DDR1Q08345 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 AP002803.1-201ENST00000528836 498 ntBASIC18.76■□□□□ 0.59
DDR1Q08345 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.76■□□□□ 0.59
DDR1Q08345 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.76■□□□□ 0.59
DDR1Q08345 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.76■□□□□ 0.59
DDR1Q08345 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.76■□□□□ 0.59
DDR1Q08345 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 PCDH8P1-201ENST00000428983 2773 ntBASIC18.76■□□□□ 0.59
DDR1Q08345 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.76■□□□□ 0.59
DDR1Q08345 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDR1Q08345 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
DDR1Q08345 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.76■□□□□ 0.59
DDR1Q08345 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms