Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 TSPY20P-201ENST00000450910 630 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.68■□□□□ 0.1
GABPB1Q06547 FAM201B-201ENST00000458407 597 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.68■□□□□ 0.1
GABPB1Q06547 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.68■□□□□ 0.1
GABPB1Q06547 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 MIR4321-201ENST00000592276 80 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.68■□□□□ 0.1
GABPB1Q06547 AC006058.3-201ENST00000606217 1069 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.68■□□□□ 0.1
GABPB1Q06547 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 AC072061.1-201ENST00000569710 2234 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GABPB1Q06547 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABPB1Q06547 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.68■□□□□ 0.1
GABPB1Q06547 AL031595.1-201ENST00000623969 4709 ntBASIC15.68■□□□□ 0.1
GABPB1Q06547 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC15.67■□□□□ 0.1
GABPB1Q06547 PMPCAP1-201ENST00000508114 1576 ntBASIC15.67■□□□□ 0.1
GABPB1Q06547 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 AC011498.7-201ENST00000624986 2027 ntBASIC15.67■□□□□ 0.1
GABPB1Q06547 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 AC136604.1-202ENST00000425471 771 ntBASIC15.67■□□□□ 0.1
GABPB1Q06547 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GABPB1Q06547 AC093724.1-201ENST00000448659 1027 ntBASIC15.67■□□□□ 0.1
GABPB1Q06547 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 RASA4DP-201ENST00000460726 1199 ntBASIC15.67■□□□□ 0.1
GABPB1Q06547 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 AL512604.3-201ENST00000569583 964 ntBASIC15.67■□□□□ 0.1
GABPB1Q06547 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GABPB1Q06547 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.67■□□□□ 0.1
GABPB1Q06547 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GABPB1Q06547 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GABPB1Q06547 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
GABPB1Q06547 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABPB1Q06547 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GABPB1Q06547 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.66■□□□□ 0.1
GABPB1Q06547 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GABPB1Q06547 AC102953.2-201ENST00000609755 3026 ntBASIC15.66■□□□□ 0.1
GABPB1Q06547 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GABPB1Q06547 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GABPB1Q06547 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GABPB1Q06547 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.66■□□□□ 0.1
GABPB1Q06547 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms