Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX3P78415 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.95■□□□□ 0.46
IRX3P78415 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX3P78415 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.95■□□□□ 0.46
IRX3P78415 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX3P78415 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.95■□□□□ 0.46
IRX3P78415 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.95■□□□□ 0.46
IRX3P78415 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.95■□□□□ 0.46
IRX3P78415 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX3P78415 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX3P78415 AC079328.2-201ENST00000561241 3354 ntBASIC17.95■□□□□ 0.46
IRX3P78415 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IRX3P78415 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.95■□□□□ 0.46
IRX3P78415 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
IRX3P78415 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
IRX3P78415 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.94■□□□□ 0.46
IRX3P78415 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
IRX3P78415 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.94■□□□□ 0.46
IRX3P78415 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.94■□□□□ 0.46
IRX3P78415 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
IRX3P78415 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.94■□□□□ 0.46
IRX3P78415 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.94■□□□□ 0.46
IRX3P78415 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
IRX3P78415 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IRX3P78415 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 AL365209.1-201ENST00000624418 6473 ntBASIC17.93■□□□□ 0.46
IRX3P78415 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
IRX3P78415 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
IRX3P78415 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 MTX1P1-201ENST00000440904 838 ntBASIC17.93■□□□□ 0.46
IRX3P78415 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX3P78415 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 MIR4313-201ENST00000580760 101 ntBASIC17.93■□□□□ 0.46
IRX3P78415 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.93■□□□□ 0.46
IRX3P78415 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.93■□□□□ 0.46
IRX3P78415 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.93■□□□□ 0.46
IRX3P78415 AL008638.5-201ENST00000623814 1298 ntBASIC17.93■□□□□ 0.46
IRX3P78415 AC006453.4-201ENST00000636949 1252 ntBASIC17.93■□□□□ 0.46
IRX3P78415 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
IRX3P78415 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX3P78415 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.93■□□□□ 0.46
IRX3P78415 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX3P78415 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.93■□□□□ 0.46
IRX3P78415 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX3P78415 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.93■□□□□ 0.46
IRX3P78415 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.93■□□□□ 0.46
IRX3P78415 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX3P78415 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms