Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.99□□□□□ -0.01
YBX1P67809 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 MYCLP2-201ENST00000449268 967 ntBASIC14.99□□□□□ -0.01
YBX1P67809 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.99□□□□□ -0.01
YBX1P67809 ELK1P1-201ENST00000485699 580 ntBASIC14.99□□□□□ -0.01
YBX1P67809 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.99□□□□□ -0.01
YBX1P67809 AP005018.1-201ENST00000525475 301 ntBASIC14.99□□□□□ -0.01
YBX1P67809 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.99□□□□□ -0.01
YBX1P67809 AC025181.2-201ENST00000606994 802 ntBASIC14.99□□□□□ -0.01
YBX1P67809 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
YBX1P67809 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
YBX1P67809 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.99□□□□□ -0.01
YBX1P67809 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
YBX1P67809 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.99□□□□□ -0.01
YBX1P67809 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.99□□□□□ -0.01
YBX1P67809 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
YBX1P67809 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 AC140479.7-201ENST00000636301 2332 ntBASIC14.99□□□□□ -0.01
YBX1P67809 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 CICP14-201ENST00000629111 2732 ntBASIC14.99□□□□□ -0.01
YBX1P67809 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
YBX1P67809 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 AC104581.4-201ENST00000623126 3052 ntBASIC14.98□□□□□ -0.01
YBX1P67809 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 AC005840.4-201ENST00000541242 2494 ntBASIC14.98□□□□□ -0.01
YBX1P67809 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.98□□□□□ -0.01
YBX1P67809 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.98□□□□□ -0.01
YBX1P67809 TP53TG3HP-202ENST00000569755 579 ntBASIC14.98□□□□□ -0.01
YBX1P67809 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.98□□□□□ -0.01
YBX1P67809 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.98□□□□□ -0.01
YBX1P67809 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 AC099568.2-201ENST00000609194 695 ntBASIC14.98□□□□□ -0.01
YBX1P67809 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
YBX1P67809 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.98□□□□□ -0.01
YBX1P67809 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.98□□□□□ -0.01
YBX1P67809 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
YBX1P67809 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.97□□□□□ -0.01
YBX1P67809 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.97□□□□□ -0.01
YBX1P67809 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
YBX1P67809 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.97□□□□□ -0.01
YBX1P67809 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
YBX1P67809 MEP1AP4-201ENST00000423244 1087 ntBASIC14.97□□□□□ -0.01
YBX1P67809 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.97□□□□□ -0.01
YBX1P67809 VDAC1P7-201ENST00000462417 847 ntBASIC14.97□□□□□ -0.01
YBX1P67809 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.97□□□□□ -0.01
YBX1P67809 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.97□□□□□ -0.01
YBX1P67809 AC036164.1-201ENST00000570544 333 ntBASIC14.97□□□□□ -0.01
YBX1P67809 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.97□□□□□ -0.01
YBX1P67809 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.97□□□□□ -0.01
YBX1P67809 AC093726.1-201ENST00000608064 963 ntBASIC14.97□□□□□ -0.01
YBX1P67809 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.97□□□□□ -0.01
YBX1P67809 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
YBX1P67809 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms