Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SMIM11AP58511 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM11AP58511 MTDHP5-201ENST00000598980 586 ntBASIC14.22□□□□□ -0.13
SMIM11AP58511 RN7SL828P-201ENST00000607615 303 ntBASIC14.22□□□□□ -0.13
SMIM11AP58511 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM11AP58511 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMIM11AP58511 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM11AP58511 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMIM11AP58511 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SMIM11AP58511 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11AP58511 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM11AP58511 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM11AP58511 KRT18P32-201ENST00000424695 1287 ntBASIC14.21□□□□□ -0.13
SMIM11AP58511 AC004832.2-201ENST00000426397 482 ntBASIC14.21□□□□□ -0.13
SMIM11AP58511 HTR5BP-201ENST00000430851 1154 ntBASIC14.21□□□□□ -0.13
SMIM11AP58511 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM11AP58511 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMIM11AP58511 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.21□□□□□ -0.13
SMIM11AP58511 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM11AP58511 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 BANF1P1-201ENST00000553684 263 ntBASIC14.21□□□□□ -0.13
SMIM11AP58511 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SMIM11AP58511 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM11AP58511 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
SMIM11AP58511 AC007967.4-201ENST00000614700 386 ntBASIC14.21□□□□□ -0.13
SMIM11AP58511 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMIM11AP58511 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SMIM11AP58511 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM11AP58511 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM11AP58511 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM11AP58511 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.21□□□□□ -0.14
SMIM11AP58511 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM11AP58511 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM11AP58511 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SMIM11AP58511 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM11AP58511 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM11AP58511 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM11AP58511 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM11AP58511 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM11AP58511 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM11AP58511 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SMIM11AP58511 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SMIM11AP58511 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM11AP58511 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMIM11AP58511 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SMIM11AP58511 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM11AP58511 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM11AP58511 SERBP1P3-201ENST00000459980 809 ntBASIC14.2□□□□□ -0.14
SMIM11AP58511 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.2□□□□□ -0.14
SMIM11AP58511 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM11AP58511 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 373.5 ms