Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH13P55290 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDH13P55290 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH13P55290 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH13P55290 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH13P55290 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH13P55290 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH13P55290 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 AC097376.2-205ENST00000610159 5334 ntBASIC15.09■□□□□ 0.01
CDH13P55290 AC140479.7-201ENST00000636301 2332 ntBASIC15.09■□□□□ 0.01
CDH13P55290 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.09■□□□□ 0.01
CDH13P55290 RPL13P2-201ENST00000440687 659 ntBASIC15.09■□□□□ 0.01
CDH13P55290 AP006288.1-201ENST00000446065 395 ntBASIC15.09■□□□□ 0.01
CDH13P55290 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH13P55290 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 AC025181.2-201ENST00000606994 802 ntBASIC15.09■□□□□ 0.01
CDH13P55290 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.09■□□□□ 0.01
CDH13P55290 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH13P55290 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.09■□□□□ 0.01
CDH13P55290 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH13P55290 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH13P55290 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH13P55290 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH13P55290 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH13P55290 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH13P55290 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH13P55290 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH13P55290 AC005089.1-201ENST00000619486 2241 ntBASIC15.08■□□□□ 0
CDH13P55290 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.08■□□□□ 0
CDH13P55290 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
CDH13P55290 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 AC007326.2-201ENST00000624224 7579 ntBASIC15.08■□□□□ 0
CDH13P55290 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.08■□□□□ 0
CDH13P55290 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CDH13P55290 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.08■□□□□ 0
CDH13P55290 AL133267.1-201ENST00000398220 340 ntBASIC15.08■□□□□ 0
CDH13P55290 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH13P55290 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.08■□□□□ 0
CDH13P55290 AC015922.1-201ENST00000421102 1152 ntBASIC15.08■□□□□ 0
CDH13P55290 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.08■□□□□ 0
CDH13P55290 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.08■□□□□ 0
CDH13P55290 HLA-J-203ENST00000494367 1087 ntBASIC15.08■□□□□ 0
CDH13P55290 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.08■□□□□ 0
CDH13P55290 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.08■□□□□ 0
CDH13P55290 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CDH13P55290 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.08■□□□□ 0
CDH13P55290 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 TEX28P1-201ENST00000613479 1221 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms