Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TUBP50607 BOLA2P3-201ENST00000404566 256 ntBASIC16.22■□□□□ 0.19
TUBP50607 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 AC112492.5-201ENST00000421897 457 ntBASIC16.22■□□□□ 0.19
TUBP50607 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBP50607 IGHV3-71-201ENST00000523324 359 ntBASIC16.22■□□□□ 0.19
TUBP50607 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 PTP4A1P2-201ENST00000546033 454 ntBASIC16.22■□□□□ 0.19
TUBP50607 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.22■□□□□ 0.19
TUBP50607 AC107373.2-201ENST00000607735 490 ntBASIC16.22■□□□□ 0.19
TUBP50607 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBP50607 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TUBP50607 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBP50607 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 AC022532.1-201ENST00000624563 1728 ntBASIC16.22■□□□□ 0.19
TUBP50607 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 AC127383.1-201ENST00000444697 1800 ntBASIC16.22■□□□□ 0.19
TUBP50607 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBP50607 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 ACKR1-201ENST00000368121 1240 ntBASIC16.21■□□□□ 0.19
TUBP50607 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.21■□□□□ 0.19
TUBP50607 KRT43P-201ENST00000434019 910 ntBASIC16.21■□□□□ 0.19
TUBP50607 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBP50607 TDH-203ENST00000531764 1110 ntBASIC16.21■□□□□ 0.19
TUBP50607 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBP50607 HILS1-202ENST00000545329 423 ntBASIC16.21■□□□□ 0.19
TUBP50607 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.21■□□□□ 0.19
TUBP50607 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBP50607 CLUHP6-201ENST00000580789 941 ntBASIC16.21■□□□□ 0.19
TUBP50607 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 AC017083.2-201ENST00000608069 979 ntBASIC16.21■□□□□ 0.19
TUBP50607 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBP50607 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBP50607 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBP50607 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms