Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL645939.5-201ENST00000606834 243 ntBASIC16.86■□□□□ 0.29
CPT1AP50416 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.86■□□□□ 0.29
CPT1AP50416 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.86■□□□□ 0.29
CPT1AP50416 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.86■□□□□ 0.29
CPT1AP50416 AL136301.1-201ENST00000615830 422 ntBASIC16.86■□□□□ 0.29
CPT1AP50416 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
CPT1AP50416 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CPT1AP50416 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.86■□□□□ 0.29
CPT1AP50416 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.86■□□□□ 0.29
CPT1AP50416 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CPT1AP50416 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.86■□□□□ 0.29
CPT1AP50416 AL157414.3-201ENST00000624276 1954 ntBASIC16.86■□□□□ 0.29
CPT1AP50416 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CPT1AP50416 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPT1AP50416 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 AC009090.5-201ENST00000624886 2285 ntBASIC16.85■□□□□ 0.29
CPT1AP50416 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 RNMTL1P1-201ENST00000454103 560 ntBASIC16.85■□□□□ 0.29
CPT1AP50416 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 MIR4683-201ENST00000579659 81 ntBASIC16.85■□□□□ 0.29
CPT1AP50416 AC097724.1-201ENST00000609581 426 ntBASIC16.85■□□□□ 0.29
CPT1AP50416 AC004923.1-202ENST00000642106 209 ntBASIC16.85■□□□□ 0.29
CPT1AP50416 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.85■□□□□ 0.29
CPT1AP50416 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.85■□□□□ 0.29
CPT1AP50416 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPT1AP50416 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPT1AP50416 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.84■□□□□ 0.29
CPT1AP50416 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CPT1AP50416 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.84■□□□□ 0.29
CPT1AP50416 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CPT1AP50416 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.84■□□□□ 0.29
CPT1AP50416 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CPT1AP50416 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 IMP3P2-201ENST00000489760 475 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms