Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.87□□□□□ -0.35
HOXA1P49639 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 MROH4P-201ENST00000431302 1578 ntBASIC12.87□□□□□ -0.35
HOXA1P49639 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HOXA1P49639 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.87□□□□□ -0.35
HOXA1P49639 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.87□□□□□ -0.35
HOXA1P49639 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 AC096734.2-201ENST00000562054 433 ntBASIC12.87□□□□□ -0.35
HOXA1P49639 AC002347.1-201ENST00000569543 541 ntBASIC12.87□□□□□ -0.35
HOXA1P49639 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.87□□□□□ -0.35
HOXA1P49639 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.87□□□□□ -0.35
HOXA1P49639 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HOXA1P49639 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
HOXA1P49639 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
HOXA1P49639 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 AC015909.5-201ENST00000624336 2266 ntBASIC12.86□□□□□ -0.35
HOXA1P49639 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.86□□□□□ -0.35
HOXA1P49639 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.86□□□□□ -0.35
HOXA1P49639 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.86□□□□□ -0.35
HOXA1P49639 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 MIR7706-201ENST00000613747 67 ntBASIC12.86□□□□□ -0.35
HOXA1P49639 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
HOXA1P49639 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
HOXA1P49639 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HOXA1P49639 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.86□□□□□ -0.35
HOXA1P49639 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HOXA1P49639 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms