Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FP325330.2-201ENST00000624219 5630 ntBASIC14.05□□□□□ -0.16
CENPAP49450 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CENPAP49450 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 FO393414.2-201ENST00000405153 598 ntBASIC14.05□□□□□ -0.16
CENPAP49450 AZGP1P1-201ENST00000411909 902 ntBASIC14.05□□□□□ -0.16
CENPAP49450 AL627223.1-201ENST00000416693 442 ntBASIC14.05□□□□□ -0.16
CENPAP49450 AC136604.1-201ENST00000418535 575 ntBASIC14.05□□□□□ -0.16
CENPAP49450 FAM58DP-201ENST00000428076 619 ntBASIC14.05□□□□□ -0.16
CENPAP49450 AP000347.1-202ENST00000435868 847 ntBASIC14.05□□□□□ -0.16
CENPAP49450 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.05□□□□□ -0.16
CENPAP49450 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.05□□□□□ -0.16
CENPAP49450 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.05□□□□□ -0.16
CENPAP49450 AC004835.2-201ENST00000603762 682 ntBASIC14.05□□□□□ -0.16
CENPAP49450 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.05□□□□□ -0.16
CENPAP49450 AC091951.1-201ENST00000512854 2465 ntBASIC14.05□□□□□ -0.16
CENPAP49450 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CENPAP49450 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CENPAP49450 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CENPAP49450 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.04□□□□□ -0.16
CENPAP49450 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 AL023775.1-201ENST00000454907 1746 ntBASIC14.04□□□□□ -0.16
CENPAP49450 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.04□□□□□ -0.16
CENPAP49450 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CENPAP49450 BX842568.4-201ENST00000421222 227 ntBASIC14.04□□□□□ -0.16
CENPAP49450 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.04□□□□□ -0.16
CENPAP49450 AC112482.1-201ENST00000492080 688 ntBASIC14.04□□□□□ -0.16
CENPAP49450 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CENPAP49450 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 AC092865.5-201ENST00000545435 363 ntBASIC14.04□□□□□ -0.16
CENPAP49450 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.04□□□□□ -0.16
CENPAP49450 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.04□□□□□ -0.16
CENPAP49450 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.04□□□□□ -0.16
CENPAP49450 AL671883.3-201ENST00000603274 991 ntBASIC14.04□□□□□ -0.16
CENPAP49450 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CENPAP49450 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CENPAP49450 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CENPAP49450 LINC01101-201ENST00000622953 1884 ntBASIC14.04□□□□□ -0.16
CENPAP49450 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms