Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 VWA5B1-202ENST00000375079 3859 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
PCP4P48539 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 SLC25A1P3-201ENST00000395415 828 ntBASIC10.15□□□□□ -0.78
PCP4P48539 OR2Z1-202ENST00000641125 1755 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
PCP4P48539 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.15□□□□□ -0.78
PCP4P48539 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.15□□□□□ -0.78
PCP4P48539 PDSS2-202ENST00000369037 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 POMGNT1-203ENST00000396420 3480 ntTSL 2 BASIC10.15□□□□□ -0.78
PCP4P48539 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.15□□□□□ -0.78
PCP4P48539 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
PCP4P48539 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 PLK4-211ENST00000515069 3431 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
PCP4P48539 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PCP4P48539 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
PCP4P48539 ZNF304-203ENST00000443917 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC10.15□□□□□ -0.79
PCP4P48539 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC10.15□□□□□ -0.79
PCP4P48539 AC026469.1-201ENST00000621095 3306 ntBASIC10.15□□□□□ -0.79
PCP4P48539 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.15□□□□□ -0.79
PCP4P48539 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
PCP4P48539 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 DNM1P35-201ENST00000501931 3188 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 POP1-202ENST00000401707 4719 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 AC239800.2-201ENST00000443018 2675 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 MBP-211ENST00000397875 2168 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 AC136604.1-202ENST00000425471 771 ntBASIC10.14□□□□□ -0.79
PCP4P48539 AC132872.1-201ENST00000566986 1195 ntBASIC10.14□□□□□ -0.79
PCP4P48539 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 AC068587.9-201ENST00000641814 219 ntBASIC10.14□□□□□ -0.79
PCP4P48539 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 Z95114.4-201ENST00000623420 3578 ntBASIC10.14□□□□□ -0.79
PCP4P48539 AC061975.1-201ENST00000564762 2736 ntBASIC10.14□□□□□ -0.79
PCP4P48539 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 AC073133.2-201ENST00000436670 2698 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.14□□□□□ -0.79
PCP4P48539 UROS-202ENST00000368778 1556 ntTSL 2 BASIC10.14□□□□□ -0.79
PCP4P48539 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PCP4P48539 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 CECR3-201ENST00000428828 1915 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 AC005622.1-201ENST00000636801 1703 ntBASIC10.13□□□□□ -0.79
PCP4P48539 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms