Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.1■□□□□ 0.33
TM4SF4P48230 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.1■□□□□ 0.33
TM4SF4P48230 DDX39AP1-201ENST00000445147 1181 ntBASIC17.1■□□□□ 0.33
TM4SF4P48230 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.1■□□□□ 0.33
TM4SF4P48230 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.1■□□□□ 0.33
TM4SF4P48230 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.1■□□□□ 0.33
TM4SF4P48230 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.1■□□□□ 0.33
TM4SF4P48230 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 AL451007.2-201ENST00000632004 563 ntBASIC17.1■□□□□ 0.33
TM4SF4P48230 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
TM4SF4P48230 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.1■□□□□ 0.33
TM4SF4P48230 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TM4SF4P48230 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.1■□□□□ 0.33
TM4SF4P48230 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.1■□□□□ 0.33
TM4SF4P48230 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM4SF4P48230 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.09■□□□□ 0.33
TM4SF4P48230 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TM4SF4P48230 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TM4SF4P48230 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.09■□□□□ 0.33
TM4SF4P48230 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TM4SF4P48230 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.09■□□□□ 0.33
TM4SF4P48230 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.09■□□□□ 0.33
TM4SF4P48230 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TM4SF4P48230 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM4SF4P48230 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF4P48230 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF4P48230 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF4P48230 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF4P48230 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TM4SF4P48230 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF4P48230 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TM4SF4P48230 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TM4SF4P48230 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM4SF4P48230 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.08■□□□□ 0.33
TM4SF4P48230 AC018629.1-201ENST00000623381 1736 ntBASIC17.08■□□□□ 0.32
TM4SF4P48230 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TM4SF4P48230 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF4P48230 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF4P48230 RNA5SP359-201ENST00000364838 113 ntBASIC17.08■□□□□ 0.32
TM4SF4P48230 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF4P48230 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TM4SF4P48230 TLE1P1-201ENST00000422965 589 ntBASIC17.08■□□□□ 0.32
TM4SF4P48230 DPY19L2P5-201ENST00000456300 331 ntBASIC17.08■□□□□ 0.32
TM4SF4P48230 FAM86B3P-203ENST00000523992 854 ntBASIC17.08■□□□□ 0.32
TM4SF4P48230 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TM4SF4P48230 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.08■□□□□ 0.32
TM4SF4P48230 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.08■□□□□ 0.32
TM4SF4P48230 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF4P48230 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF4P48230 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM4SF4P48230 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms