Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 HSPB1P2-201ENST00000448722 546 ntBASIC17.51■□□□□ 0.39
COPB2P35606 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 AC010491.1-201ENST00000563101 2797 ntBASIC17.51■□□□□ 0.39
COPB2P35606 AC020914.3-201ENST00000594712 304 ntBASIC17.51■□□□□ 0.39
COPB2P35606 ZACNP1-201ENST00000612259 710 ntBASIC17.51■□□□□ 0.39
COPB2P35606 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.51■□□□□ 0.39
COPB2P35606 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.51■□□□□ 0.39
COPB2P35606 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.51■□□□□ 0.39
COPB2P35606 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.51■□□□□ 0.39
COPB2P35606 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPB2P35606 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COPB2P35606 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.5■□□□□ 0.39
COPB2P35606 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COPB2P35606 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.5■□□□□ 0.39
COPB2P35606 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 EIF3FP3-201ENST00000434851 1086 ntBASIC17.5■□□□□ 0.39
COPB2P35606 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.5■□□□□ 0.39
COPB2P35606 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.5■□□□□ 0.39
COPB2P35606 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.5■□□□□ 0.39
COPB2P35606 AKR7A2P1-201ENST00000460134 915 ntBASIC17.5■□□□□ 0.39
COPB2P35606 COX5BP1-201ENST00000507622 393 ntBASIC17.5■□□□□ 0.39
COPB2P35606 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 RN7SL713P-201ENST00000582127 302 ntBASIC17.5■□□□□ 0.39
COPB2P35606 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.5■□□□□ 0.39
COPB2P35606 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.5■□□□□ 0.39
COPB2P35606 AL096828.3-201ENST00000615354 462 ntBASIC17.5■□□□□ 0.39
COPB2P35606 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.5■□□□□ 0.39
COPB2P35606 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COPB2P35606 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 AL023775.1-201ENST00000454907 1746 ntBASIC17.5■□□□□ 0.39
COPB2P35606 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPB2P35606 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.49■□□□□ 0.39
COPB2P35606 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COPB2P35606 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COPB2P35606 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.49■□□□□ 0.39
COPB2P35606 AC104457.1-201ENST00000401024 814 ntBASIC17.49■□□□□ 0.39
COPB2P35606 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.49■□□□□ 0.39
COPB2P35606 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
COPB2P35606 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.49■□□□□ 0.39
COPB2P35606 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
COPB2P35606 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.49■□□□□ 0.39
COPB2P35606 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPB2P35606 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPB2P35606 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPB2P35606 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.48■□□□□ 0.39
COPB2P35606 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COPB2P35606 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPB2P35606 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPB2P35606 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms