Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RFC4P35249 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
RFC4P35249 AC010141.1-201ENST00000411585 623 ntBASIC19.07■□□□□ 0.64
RFC4P35249 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.07■□□□□ 0.64
RFC4P35249 HLA-J-204ENST00000495278 958 ntBASIC19.07■□□□□ 0.64
RFC4P35249 PGAM1P5-201ENST00000548011 764 ntBASIC19.07■□□□□ 0.64
RFC4P35249 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC4P35249 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC4P35249 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RFC4P35249 AC008805.1-201ENST00000590892 364 ntBASIC19.07■□□□□ 0.64
RFC4P35249 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.07■□□□□ 0.64
RFC4P35249 AL805961.1-201ENST00000642026 753 ntBASIC19.07■□□□□ 0.64
RFC4P35249 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
RFC4P35249 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC4P35249 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RFC4P35249 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC4P35249 AL157414.3-201ENST00000624276 1954 ntBASIC19.06■□□□□ 0.64
RFC4P35249 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC4P35249 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RFC4P35249 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.06■□□□□ 0.64
RFC4P35249 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 RPL5P21-201ENST00000404620 815 ntBASIC19.06■□□□□ 0.64
RFC4P35249 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.06■□□□□ 0.64
RFC4P35249 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC4P35249 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.06■□□□□ 0.64
RFC4P35249 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RFC4P35249 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC4P35249 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.06■□□□□ 0.64
RFC4P35249 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC4P35249 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RFC4P35249 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RFC4P35249 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RFC4P35249 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
RFC4P35249 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 TNRC18P3-201ENST00000441896 2691 ntBASIC19.05■□□□□ 0.64
RFC4P35249 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RFC4P35249 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RFC4P35249 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.05■□□□□ 0.64
RFC4P35249 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC4P35249 VDAC1P1-201ENST00000439229 848 ntBASIC19.05■□□□□ 0.64
RFC4P35249 RN7SL8P-201ENST00000461771 266 ntBASIC19.05■□□□□ 0.64
RFC4P35249 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC4P35249 POU5F1P2-201ENST00000521750 823 ntBASIC19.05■□□□□ 0.64
RFC4P35249 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC4P35249 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RFC4P35249 AC135983.4-201ENST00000564116 1262 ntBASIC19.05■□□□□ 0.64
RFC4P35249 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.05■□□□□ 0.64
RFC4P35249 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
RFC4P35249 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC4P35249 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RFC4P35249 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RFC4P35249 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC4P35249 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC4P35249 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RFC4P35249 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 PCDHA12-202ENST00000613593 2588 ntBASIC19.04■□□□□ 0.64
RFC4P35249 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 AL360270.3-201ENST00000609118 1348 ntBASIC19.04■□□□□ 0.64
RFC4P35249 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms