Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CR383656.2-201ENST00000548656 2254 ntBASIC15.22■□□□□ 0.03
VARSP26640 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.22■□□□□ 0.03
VARSP26640 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 AC074338.1-201ENST00000416825 156 ntBASIC15.22■□□□□ 0.03
VARSP26640 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 SERBP1P3-201ENST00000459980 809 ntBASIC15.22■□□□□ 0.03
VARSP26640 AC004890.2-204ENST00000481968 304 ntBASIC15.22■□□□□ 0.03
VARSP26640 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.22■□□□□ 0.03
VARSP26640 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.22■□□□□ 0.03
VARSP26640 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 AL596325.1-201ENST00000563991 1082 ntBASIC15.22■□□□□ 0.03
VARSP26640 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.22■□□□□ 0.03
VARSP26640 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.22■□□□□ 0.03
VARSP26640 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VARSP26640 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.22■□□□□ 0.03
VARSP26640 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.22■□□□□ 0.03
VARSP26640 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VARSP26640 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 AC007292.2-201ENST00000593524 1812 ntBASIC15.22■□□□□ 0.03
VARSP26640 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
VARSP26640 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARSP26640 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.22■□□□□ 0.03
VARSP26640 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VARSP26640 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
VARSP26640 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 AC126755.1-201ENST00000525846 6405 ntBASIC15.21■□□□□ 0.03
VARSP26640 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 AC091951.1-201ENST00000512854 2465 ntBASIC15.21■□□□□ 0.03
VARSP26640 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.21■□□□□ 0.03
VARSP26640 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.21■□□□□ 0.03
VARSP26640 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.21■□□□□ 0.03
VARSP26640 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.21■□□□□ 0.03
VARSP26640 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.21■□□□□ 0.03
VARSP26640 AP005018.1-201ENST00000525475 301 ntBASIC15.21■□□□□ 0.03
VARSP26640 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.21■□□□□ 0.03
VARSP26640 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC15.21■□□□□ 0.03
VARSP26640 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VARSP26640 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.21■□□□□ 0.03
VARSP26640 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.21■□□□□ 0.03
VARSP26640 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARSP26640 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
VARSP26640 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VARSP26640 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.21■□□□□ 0.02
VARSP26640 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VARSP26640 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.21■□□□□ 0.02
VARSP26640 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms