Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN3P26045 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN3P26045 SLC7A15P-201ENST00000424028 1363 ntBASIC15.68■□□□□ 0.1
PTPN3P26045 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.68■□□□□ 0.1
PTPN3P26045 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 VDAC1P7-201ENST00000462417 847 ntBASIC15.68■□□□□ 0.1
PTPN3P26045 AC004066.1-201ENST00000502488 802 ntBASIC15.68■□□□□ 0.1
PTPN3P26045 AC026410.3-201ENST00000514280 936 ntBASIC15.68■□□□□ 0.1
PTPN3P26045 RRP7BP-205ENST00000566851 833 ntBASIC15.68■□□□□ 0.1
PTPN3P26045 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PTPN3P26045 AC107373.2-201ENST00000607735 490 ntBASIC15.68■□□□□ 0.1
PTPN3P26045 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PTPN3P26045 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.68■□□□□ 0.1
PTPN3P26045 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN3P26045 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PTPN3P26045 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN3P26045 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN3P26045 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 AC055876.2-201ENST00000531834 546 ntBASIC15.67■□□□□ 0.1
PTPN3P26045 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.67■□□□□ 0.1
PTPN3P26045 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.67■□□□□ 0.1
PTPN3P26045 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PTPN3P26045 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 AC099568.2-201ENST00000609194 695 ntBASIC15.67■□□□□ 0.1
PTPN3P26045 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 MIR8072-201ENST00000614241 80 ntBASIC15.67■□□□□ 0.1
PTPN3P26045 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PTPN3P26045 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.67■□□□□ 0.1
PTPN3P26045 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN3P26045 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN3P26045 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 AC007787.1-201ENST00000588095 1583 ntBASIC15.66■□□□□ 0.1
PTPN3P26045 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PTPN3P26045 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms