Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MIR943-201ENST00000401286 94 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 SPDYE11-202ENST00000450699 704 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 TIMM8BP1-201ENST00000452384 211 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 SLC25A39P2-201ENST00000537614 270 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN3P20807 SPDYE9P-201ENST00000570642 692 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 SPDYE10P-202ENST00000612005 668 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 SPDYE8P-202ENST00000612377 668 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 AC008761.3-201ENST00000624803 892 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN3P20807 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN3P20807 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN3P20807 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CAPN3P20807 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN3P20807 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 TUBB3P1-201ENST00000405796 1332 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CAPN3P20807 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN3P20807 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CAPN3P20807 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 AC097359.2-201ENST00000604992 2389 ntBASIC14.87□□□□□ -0.03
CAPN3P20807 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 AC104581.4-201ENST00000623126 3052 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 AC005840.4-201ENST00000541242 2494 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CAPN3P20807 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CAPN3P20807 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN3P20807 HIST3H2BA-201ENST00000436555 524 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 AC007274.1-201ENST00000439805 662 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.86□□□□□ -0.03
CAPN3P20807 KLF2P3-201ENST00000451977 1087 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN3P20807 IGHV3-62-201ENST00000520057 340 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 BANF1P1-201ENST00000553684 263 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 KRT8P23-201ENST00000560090 1207 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 RARRES2P9-201ENST00000565168 469 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.86□□□□□ -0.03
CAPN3P20807 AP001059.3-201ENST00000619053 235 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 AC084121.4-201ENST00000641598 221 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 AF228730.8-201ENST00000642140 221 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN3P20807 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 LINC01230-201ENST00000625222 3017 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN3P20807 AC041040.2-201ENST00000622926 2899 ntBASIC14.86□□□□□ -0.03
CAPN3P20807 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CAPN3P20807 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN3P20807 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN3P20807 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN3P20807 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN3P20807 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms