Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
ERCC2P18074 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
ERCC2P18074 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ERCC2P18074 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ERCC2P18074 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.81■□□□□ 0.12
ERCC2P18074 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.81■□□□□ 0.12
ERCC2P18074 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
ERCC2P18074 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 CRB3P1-201ENST00000449338 276 ntBASIC15.81■□□□□ 0.12
ERCC2P18074 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
ERCC2P18074 KRT8P22-201ENST00000562317 1415 ntBASIC15.81■□□□□ 0.12
ERCC2P18074 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.81■□□□□ 0.12
ERCC2P18074 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.81■□□□□ 0.12
ERCC2P18074 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.81■□□□□ 0.12
ERCC2P18074 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.81■□□□□ 0.12
ERCC2P18074 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ERCC2P18074 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ERCC2P18074 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ERCC2P18074 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERCC2P18074 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC2P18074 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ERCC2P18074 SPDYE22P-201ENST00000582158 798 ntBASIC15.8■□□□□ 0.12
ERCC2P18074 AC133539.2-201ENST00000604757 467 ntBASIC15.8■□□□□ 0.12
ERCC2P18074 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 ACE3P-201ENST00000423435 1973 ntBASIC15.8■□□□□ 0.12
ERCC2P18074 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC2P18074 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC2P18074 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC2P18074 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms