Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC25.49■■□□□ 1.67
CFTRP13569 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC25.49■■□□□ 1.67
CFTRP13569 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC25.49■■□□□ 1.67
CFTRP13569 GCSHP3-201ENST00000431120 391 ntBASIC25.49■■□□□ 1.67
CFTRP13569 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC25.49■■□□□ 1.67
CFTRP13569 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC25.49■■□□□ 1.67
CFTRP13569 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC25.49■■□□□ 1.67
CFTRP13569 RHEB-207ENST00000496004 744 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC25.49■■□□□ 1.67
CFTRP13569 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC25.49■■□□□ 1.67
CFTRP13569 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CFTRP13569 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CFTRP13569 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC25.49■■□□□ 1.67
CFTRP13569 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFTRP13569 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC25.48■■□□□ 1.67
CFTRP13569 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFTRP13569 AP003398.1-201ENST00000531124 318 ntBASIC25.48■■□□□ 1.67
CFTRP13569 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC25.48■■□□□ 1.67
CFTRP13569 HKR1-225ENST00000592168 566 ntTSL 4 BASIC25.48■■□□□ 1.67
CFTRP13569 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC25.48■■□□□ 1.67
CFTRP13569 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CFTRP13569 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC25.48■■□□□ 1.67
CFTRP13569 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFTRP13569 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC25.48■■□□□ 1.67
CFTRP13569 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC25.48■■□□□ 1.67
CFTRP13569 AR-207ENST00000612010 3896 ntTSL 5 BASIC25.48■■□□□ 1.67
CFTRP13569 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CFTRP13569 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC25.48■■□□□ 1.67
CFTRP13569 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CFTRP13569 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CFTRP13569 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC25.48■■□□□ 1.67
CFTRP13569 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 NME2-201ENST00000393183 568 ntTSL 2 BASIC25.47■■□□□ 1.67
CFTRP13569 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 AREG-202ENST00000502307 956 ntTSL 5 BASIC25.47■■□□□ 1.67
CFTRP13569 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 AC011247.3-201ENST00000603297 438 ntBASIC25.47■■□□□ 1.67
CFTRP13569 AP001527.2-201ENST00000614441 631 ntBASIC25.47■■□□□ 1.67
CFTRP13569 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC25.47■■□□□ 1.67
CFTRP13569 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC25.47■■□□□ 1.67
CFTRP13569 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CFTRP13569 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC25.47■■□□□ 1.67
CFTRP13569 AC013726.1-201ENST00000563747 2285 ntBASIC25.47■■□□□ 1.67
CFTRP13569 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFTRP13569 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC25.47■■□□□ 1.67
CFTRP13569 AC093909.3-201ENST00000504783 336 ntBASIC25.47■■□□□ 1.67
CFTRP13569 AC084752.1-201ENST00000509766 622 ntBASIC25.47■■□□□ 1.67
CFTRP13569 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC25.47■■□□□ 1.67
CFTRP13569 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC25.47■■□□□ 1.67
CFTRP13569 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC25.47■■□□□ 1.67
CFTRP13569 KRT8P28-201ENST00000433288 1390 ntBASIC25.47■■□□□ 1.67
CFTRP13569 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC25.46■■□□□ 1.67
CFTRP13569 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CFTRP13569 HCG27-204ENST00000424675 895 ntTSL 3 BASIC25.46■■□□□ 1.67
CFTRP13569 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 DPY19L2P5-201ENST00000456300 331 ntBASIC25.46■■□□□ 1.67
CFTRP13569 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC25.46■■□□□ 1.67
CFTRP13569 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC25.46■■□□□ 1.67
CFTRP13569 AC012073.1-201ENST00000606114 1108 ntBASIC25.46■■□□□ 1.67
CFTRP13569 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CFTRP13569 ETV2-207ENST00000619399 994 ntTSL 5 BASIC25.46■■□□□ 1.67
CFTRP13569 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 AC002472.4-201ENST00000641915 272 ntBASIC25.46■■□□□ 1.67
CFTRP13569 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFTRP13569 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC25.45■■□□□ 1.67
CFTRP13569 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CFTRP13569 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
CFTRP13569 SALL4P5-201ENST00000419001 1760 ntBASIC25.45■■□□□ 1.66
CFTRP13569 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFTRP13569 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFTRP13569 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFTRP13569 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFTRP13569 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFTRP13569 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFTRP13569 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC25.45■■□□□ 1.66
CFTRP13569 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms