Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHRNA1P02708 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHRNA1P02708 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHRNA1P02708 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA1P02708 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CHRNA1P02708 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA1P02708 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA1P02708 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA1P02708 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 DPM3-202ENST00000368399 517 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CHRNA1P02708 GHSR-202ENST00000427970 912 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 UPF3AP2-201ENST00000457924 1132 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA1P02708 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.55■□□□□ 0.24
CHRNA1P02708 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA1P02708 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.55■□□□□ 0.24
CHRNA1P02708 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 AC079328.1-201ENST00000560358 952 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA1P02708 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.55■□□□□ 0.24
CHRNA1P02708 MIR4783-201ENST00000580343 82 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.55■□□□□ 0.24
CHRNA1P02708 AL358472.3-201ENST00000608147 415 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA1P02708 AC097724.1-201ENST00000609581 426 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA1P02708 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHRNA1P02708 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA1P02708 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA1P02708 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 REXO1L4P-201ENST00000605109 1937 ntBASIC16.55■□□□□ 0.24
CHRNA1P02708 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 KRT8P29-201ENST00000420409 1371 ntBASIC16.54■□□□□ 0.24
CHRNA1P02708 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CHRNA1P02708 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 ELK2AP-201ENST00000392510 1007 ntBASIC16.54■□□□□ 0.24
CHRNA1P02708 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA1P02708 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA1P02708 RNMTL1P1-201ENST00000454103 560 ntBASIC16.54■□□□□ 0.24
CHRNA1P02708 AC021723.1-201ENST00000486306 515 ntBASIC16.54■□□□□ 0.24
CHRNA1P02708 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRNA1P02708 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRNA1P02708 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA1P02708 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.54■□□□□ 0.24
CHRNA1P02708 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA1P02708 AC016629.1-201ENST00000596579 586 ntBASIC16.54■□□□□ 0.24
CHRNA1P02708 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHRNA1P02708 AL023803.2-201ENST00000620080 638 ntBASIC16.54■□□□□ 0.24
CHRNA1P02708 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHRNA1P02708 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHRNA1P02708 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA1P02708 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRNA1P02708 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA1P02708 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRNA1P02708 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms