Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 AC134407.2-201ENST00000625089 1978 ntBASIC12.34□□□□□ -0.43
APOC3P02656 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.34□□□□□ -0.43
APOC3P02656 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
APOC3P02656 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.34□□□□□ -0.43
APOC3P02656 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 BX088651.1-201ENST00000540551 451 ntBASIC12.34□□□□□ -0.43
APOC3P02656 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC3P02656 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOC3P02656 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC3P02656 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOC3P02656 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC3P02656 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOC3P02656 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
APOC3P02656 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.33□□□□□ -0.43
APOC3P02656 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 AL022323.5-201ENST00000624101 2059 ntBASIC12.33□□□□□ -0.44
APOC3P02656 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC3P02656 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC3P02656 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC3P02656 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 FAM220CP-201ENST00000395253 831 ntBASIC12.33□□□□□ -0.44
APOC3P02656 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 SLC25A1P2-201ENST00000430693 912 ntBASIC12.33□□□□□ -0.44
APOC3P02656 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOC3P02656 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOC3P02656 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC3P02656 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOC3P02656 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC3P02656 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC3P02656 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOC3P02656 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms