Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.97■□□□□ 0.63
CACNA1FO60840 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CACNA1FO60840 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AC020910.5-201ENST00000623668 1865 ntBASIC18.97■□□□□ 0.63
CACNA1FO60840 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA1FO60840 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AC026434.2-201ENST00000506094 1078 ntBASIC18.97■□□□□ 0.63
CACNA1FO60840 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.97■□□□□ 0.63
CACNA1FO60840 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNA1FO60840 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA1FO60840 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 REXO1L6P-201ENST00000603433 1515 ntBASIC18.96■□□□□ 0.63
CACNA1FO60840 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CACNA1FO60840 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA1FO60840 SERPINA13P-202ENST00000478994 924 ntBASIC18.96■□□□□ 0.63
CACNA1FO60840 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNA1FO60840 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA1FO60840 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CACNA1FO60840 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA1FO60840 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA1FO60840 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CACNA1FO60840 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.62
CACNA1FO60840 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNA1FO60840 KRT8P4-201ENST00000509735 1454 ntBASIC18.95■□□□□ 0.62
CACNA1FO60840 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNA1FO60840 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 AL157407.1-201ENST00000435784 904 ntBASIC18.95■□□□□ 0.62
CACNA1FO60840 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNA1FO60840 PUDPP3-201ENST00000445368 636 ntBASIC18.95■□□□□ 0.62
CACNA1FO60840 AC091804.1-201ENST00000486888 567 ntBASIC18.95■□□□□ 0.62
CACNA1FO60840 HLA-J-204ENST00000495278 958 ntBASIC18.95■□□□□ 0.62
CACNA1FO60840 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.95■□□□□ 0.62
CACNA1FO60840 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 HYMAI-201ENST00000635591 3347 ntBASIC18.95■□□□□ 0.62
CACNA1FO60840 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CACNA1FO60840 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNA1FO60840 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CACNA1FO60840 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CACNA1FO60840 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1FO60840 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms