Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 EEF1DP4-201ENST00000446006 880 ntBASIC14.46□□□□□ -0.09
HCN1O60741 AP005018.1-201ENST00000525475 301 ntBASIC14.46□□□□□ -0.09
HCN1O60741 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.46□□□□□ -0.09
HCN1O60741 API5-211ENST00000534695 560 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.46□□□□□ -0.09
HCN1O60741 AL596325.1-201ENST00000563991 1082 ntBASIC14.46□□□□□ -0.09
HCN1O60741 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 SRD5A3P1-201ENST00000603021 949 ntBASIC14.46□□□□□ -0.09
HCN1O60741 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 AC004461.2-201ENST00000629517 803 ntBASIC14.46□□□□□ -0.09
HCN1O60741 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 AL109936.8-201ENST00000641772 604 ntBASIC14.46□□□□□ -0.09
HCN1O60741 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 BNIP3P1-202ENST00000550043 1585 ntBASIC14.46□□□□□ -0.09
HCN1O60741 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCN1O60741 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.46□□□□□ -0.1
HCN1O60741 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.46□□□□□ -0.1
HCN1O60741 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
HCN1O60741 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCN1O60741 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.46□□□□□ -0.1
HCN1O60741 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCN1O60741 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.46□□□□□ -0.1
HCN1O60741 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.46□□□□□ -0.1
HCN1O60741 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HCN1O60741 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.46□□□□□ -0.1
HCN1O60741 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCN1O60741 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HCN1O60741 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
HCN1O60741 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 REXO1L1P-202ENST00000608646 1974 ntBASIC14.45□□□□□ -0.1
HCN1O60741 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN1O60741 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 HIST3H2BA-201ENST00000436555 524 ntBASIC14.45□□□□□ -0.1
HCN1O60741 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN1O60741 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN1O60741 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN1O60741 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN1O60741 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN1O60741 AC055876.2-201ENST00000531834 546 ntBASIC14.45□□□□□ -0.1
HCN1O60741 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.45□□□□□ -0.1
HCN1O60741 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HCN1O60741 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCN1O60741 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN1O60741 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.44□□□□□ -0.1
HCN1O60741 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HCN1O60741 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
HCN1O60741 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN1O60741 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms