Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 AC084364.1-201ENST00000551967 1556 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 AF186996.4-201ENST00000467186 377 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.61□□□□□ -0.39
SSSCA1O60232 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 AC096734.2-201ENST00000562054 433 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 AC011467.4-201ENST00000594891 528 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 TP73-AS1-207ENST00000624167 988 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 AL137784.3-201ENST00000623858 2288 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
SSSCA1O60232 AP001267.2-201ENST00000532619 2086 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 AC107918.4-201ENST00000641966 3141 ntBASIC12.61□□□□□ -0.39
SSSCA1O60232 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.61□□□□□ -0.39
SSSCA1O60232 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SSSCA1O60232 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 CYP4F24P-201ENST00000586049 1580 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
SSSCA1O60232 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 FAM197Y8-203ENST00000450145 560 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 AC018712.1-201ENST00000455767 687 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.6□□□□□ -0.39
SSSCA1O60232 AC105233.2-201ENST00000523697 349 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 AF228730.5-201ENST00000530288 346 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 AP000845.1-201ENST00000581677 2131 ntBASIC12.6□□□□□ -0.39
SSSCA1O60232 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.6□□□□□ -0.39
SSSCA1O60232 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSSCA1O60232 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
SSSCA1O60232 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.6□□□□□ -0.39
SSSCA1O60232 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.6□□□□□ -0.39
SSSCA1O60232 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms