Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CXCL13O43927 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
CXCL13O43927 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.76□□□□□ -0.21
CXCL13O43927 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.76□□□□□ -0.21
CXCL13O43927 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.76□□□□□ -0.21
CXCL13O43927 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.76□□□□□ -0.21
CXCL13O43927 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CXCL13O43927 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCL13O43927 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.75□□□□□ -0.21
CXCL13O43927 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CXCL13O43927 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.75□□□□□ -0.21
CXCL13O43927 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 AC023024.2-201ENST00000623561 1993 ntBASIC13.75□□□□□ -0.21
CXCL13O43927 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 ACKR1-201ENST00000368121 1240 ntBASIC13.75□□□□□ -0.21
CXCL13O43927 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 BAATP1-201ENST00000412284 1225 ntBASIC13.75□□□□□ -0.21
CXCL13O43927 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCL13O43927 USP32P1-208ENST00000506594 1164 ntBASIC13.75□□□□□ -0.21
CXCL13O43927 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SLC25A47P1-201ENST00000531577 414 ntBASIC13.75□□□□□ -0.21
CXCL13O43927 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL13O43927 AL158070.2-201ENST00000623713 1621 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms