Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 AC084364.1-201ENST00000551967 1556 ntBASIC16.31■□□□□ 0.2
CAPN9O14815 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.31■□□□□ 0.2
CAPN9O14815 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.31■□□□□ 0.2
CAPN9O14815 AC123567.1-201ENST00000548294 1261 ntBASIC16.31■□□□□ 0.2
CAPN9O14815 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CAPN9O14815 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.31■□□□□ 0.2
CAPN9O14815 AL391069.4-201ENST00000609583 481 ntBASIC16.31■□□□□ 0.2
CAPN9O14815 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.31■□□□□ 0.2
CAPN9O14815 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN9O14815 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN9O14815 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CAPN9O14815 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CAPN9O14815 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CAPN9O14815 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN9O14815 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CAPN9O14815 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN9O14815 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN9O14815 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 SSR4P1-203ENST00000599569 2260 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 OR8S1-201ENST00000310194 1080 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CAPN9O14815 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
CAPN9O14815 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 API5-211ENST00000534695 560 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 AC140912.1-201ENST00000577171 1054 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 AC027307.3-201ENST00000594262 1100 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 AC000095.1-201ENST00000603208 874 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CAPN9O14815 AC007431.3-201ENST00000623221 587 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CAPN9O14815 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN9O14815 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 AC097376.2-205ENST00000610159 5334 ntBASIC16.3■□□□□ 0.2
CAPN9O14815 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN9O14815 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN9O14815 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN9O14815 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN9O14815 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CAPN9O14815 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN9O14815 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN9O14815 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN9O14815 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN9O14815 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CAPN9O14815 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CAPN9O14815 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPN9O14815 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms