Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 AC018442.1-201ENST00000421439 2061 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CICP14-201ENST00000629111 2732 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 AL513477.1-201ENST00000602865 2407 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AC067930.6-201ENST00000623257 4947 ntBASIC13.57□□□□□ -0.24
NPIPB4C9JG80 KRT8P22-201ENST00000562317 1415 ntBASIC13.57□□□□□ -0.24
NPIPB4C9JG80 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AC092552.1-201ENST00000547243 906 ntBASIC13.57□□□□□ -0.24
NPIPB4C9JG80 DUX4L47-201ENST00000566374 394 ntBASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 TMEM261P1-201ENST00000604899 340 ntBASIC13.57□□□□□ -0.24
NPIPB4C9JG80 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.57□□□□□ -0.24
NPIPB4C9JG80 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPB4C9JG80 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 C1QBPP1-201ENST00000400117 770 ntBASIC13.56□□□□□ -0.24
NPIPB4C9JG80 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPB4C9JG80 SOCS2P1-201ENST00000417727 557 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms