Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MIR4313-201ENST00000580760 101 ntBASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC091951.1-201ENST00000512854 2465 ntBASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CHCHD2P3-201ENST00000603038 451 ntBASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CICP24-201ENST00000605464 2705 ntBASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms