Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 KRT8P24-201ENST00000560290 1559 ntBASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 MIR346-201ENST00000362234 95 ntBASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 HIST3H2BA-201ENST00000436555 524 ntBASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 RNA5SP415-201ENST00000517246 115 ntBASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AC015818.8-201ENST00000587907 1519 ntBASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV3S1A0A5B6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 TARDBPP1-201ENST00000442013 1203 ntBASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AC112191.1-201ENST00000523689 701 ntBASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AC018845.2-201ENST00000568326 409 ntBASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 KRT8P22-201ENST00000562317 1415 ntBASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms