Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 AC011467.4-201ENST00000594891 528 ntBASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 AC131212.3-201ENST00000624087 4219 ntBASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AL031008.1-201ENST00000619963 541 ntBASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AC012313.10-201ENST00000623509 926 ntBASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV18A0A075B6X5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV18A0A075B6X5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms